升级 NUPACK 4.1 并支持混合材料设计

This commit is contained in:
Lihatoo 2026-08-20 16:33:16 +08:00
parent 5daa60a464
commit c6189d857d
33 changed files with 5830 additions and 466 deletions

10
.gitignore vendored
View file

@ -3,6 +3,9 @@ __pycache__/
.pytest_cache/
.mypy_cache/
.DS_Store
.env
.sisyphus/
ltest.sh
# Local exports and captured reference site assets are not needed to rebuild the service.
nupack-history-*.json
@ -12,10 +15,9 @@ NUPACK_files/
# The Docker build uses the vendored cp312 Linux x86_64 wheel plus the ViennaRNA tarball.
rna/ViennaRNA-2.7.2/
rna/nupack-4.0.2.0.zip
nupack/vendor/nupack-4.0.2.0/source/
nupack/vendor/nupack-4.0.2.0/package/*.whl
!nupack/vendor/nupack-4.0.2.0/package/nupack-4.0.2.0-cp312-cp312-linux_x86_64.whl
rna/nupack-*.zip
nupack/vendor/nupack-4.1.0.1/source/
nupack/vendor/nupack-4.1.0.1/package/*.whl
# Runtime state mounted from Docker containers.
runtime/redis/
runtime/account/