np_app (v4.7)

Published 2026-07-21 14:16:48 +08:00 by lihato in lihato/np_app

Pull the image from the command line:

docker pull git.lihato.icu/lihato/np_app:v4.7

Digest

sha256:ed0eddf450c3139f2ecce8d6eda963cd6b333c735ccd9e33e81ab5d448c9fdad

For more information on the Container registry, see the documentation.

# debian.sh --arch 'amd64' out/ 'trixie' '@1773619200'

ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

ENV LANG=C.UTF-8

RUN /bin/sh -c set -eux; apt-get update; apt-get install -y --no-install-recommends ca-certificates netbase tzdata ; apt-get dist-clean # buildkit

ENV GPG_KEY=7169605F62C751356D054A26A821E680E5FA6305

ENV PYTHON_VERSION=3.12.13

ENV PYTHON_SHA256=c08bc65a81971c1dd5783182826503369466c7e67374d1646519adf05207b684

RUN /bin/sh -c set -eux; savedAptMark="$(apt-mark showmanual)"; apt-get update; apt-get install -y --no-install-recommends dpkg-dev gcc gnupg libbluetooth-dev libbz2-dev libc6-dev libdb-dev libffi-dev libgdbm-dev liblzma-dev libncursesw5-dev libreadline-dev libsqlite3-dev libssl-dev make tk-dev uuid-dev wget xz-utils zlib1g-dev ; wget -O python.tar.xz "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz"; echo "$PYTHON_SHA256 *python.tar.xz" | sha256sum -c -; wget -O python.tar.xz.asc "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz.asc"; GNUPGHOME="$(mktemp -d)"; export GNUPGHOME; gpg --batch --keyserver hkps://keys.openpgp.org --recv-keys "$GPG_KEY"; gpg --batch --verify python.tar.xz.asc python.tar.xz; gpgconf --kill all; rm -rf "$GNUPGHOME" python.tar.xz.asc; mkdir -p /usr/src/python; tar --extract --directory /usr/src/python --strip-components=1 --file python.tar.xz; rm python.tar.xz; cd /usr/src/python; gnuArch="$(dpkg-architecture --query DEB_BUILD_GNU_TYPE)"; ./configure --build="$gnuArch" --enable-loadable-sqlite-extensions --enable-optimizations --enable-option-checking=fatal --enable-shared $(test "${gnuArch%%-*}" != 'riscv64' && echo '--with-lto') --with-ensurepip ; nproc="$(nproc)"; EXTRA_CFLAGS="$(dpkg-buildflags --get CFLAGS)"; LDFLAGS="$(dpkg-buildflags --get LDFLAGS)"; LDFLAGS="${LDFLAGS:-} -Wl,--strip-all"; arch="$(dpkg --print-architecture)"; arch="${arch##*-}"; case "$arch" in amd64|arm64) EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer"; ;; i386) ;; *) EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer"; ;; esac; make -j "$nproc" "EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" "LDFLAGS=${LDFLAGS:-}" ; rm python; make -j "$nproc" "EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" "LDFLAGS=${LDFLAGS:-} -Wl,-rpath='\$\$ORIGIN/../lib'" python ; make install; cd /; rm -rf /usr/src/python; find /usr/local -depth $ \( -type d -a \( -name test -o -name tests -o -name idle_test $ \) -o $ -type f -a \( -name '*.pyc' -o -name '*.pyo' -o -name 'libpython*.a' $ \) \) -exec rm -rf '{}' + ; ldconfig; apt-mark auto '.*' > /dev/null; apt-mark manual $savedAptMark; find /usr/local -type f -executable -not $ -name '*tkinter*' $ -exec ldd '{}' ';' | awk '/=>/ { so = $(NF-1); if (index(so, "/usr/local/") == 1) { next }; gsub("^/(usr/)?", "", so); printf "*%s\n", so }' | sort -u | xargs -rt dpkg-query --search | awk 'sub(":$", "", $1) { print $1 }' | sort -u | xargs -r apt-mark manual ; apt-get purge -y --auto-remove -o APT::AutoRemove::RecommendsImportant=false; apt-get dist-clean; export PYTHONDONTWRITEBYTECODE=1; python3 --version; pip3 --version # buildkit

RUN /bin/sh -c set -eux; for src in idle3 pip3 pydoc3 python3 python3-config; do dst="$(echo "$src" | tr -d 3)"; [ -s "/usr/local/bin/$src" ]; [ ! -e "/usr/local/bin/$dst" ]; ln -svT "$src" "/usr/local/bin/$dst"; done # buildkit

CMD ["python3"]

ENV PYTHONDONTWRITEBYTECODE=1

ENV PYTHONUNBUFFERED=1

ENV NP_HOST=0.0.0.0

ENV NP_PORT=18765

ENV ENABLE_RNAPLOT=1

WORKDIR /app

/bin/sh -c apt-get update && apt-get install -y --no-install-recommends autoconf automake build-essential libgsl-dev libtool pkg-config perl && rm -rf /var/lib/apt/lists/*

COPY dir:9127ae6ac38f32e52fe738f981ae2c23efef5e6b02238f1a609b1604d5c89c66 in /tmp/nupack-package

COPY file:42d759471230eccd5e25cd5158d6644b6acd7aa9bbc7dd2af2ae8e9d5fd75a31 in /tmp/ViennaRNA-2.7.2.tar.gz

/bin/sh -c cd /tmp && tar -xzf ViennaRNA-2.7.2.tar.gz && cd ViennaRNA-2.7.2 && ./configure --without-python --without-perl && make -j"$(nproc)" && make install && ldconfig && rm -rf /tmp/ViennaRNA-2.7.2 /tmp/ViennaRNA-2.7.2.tar.gz

/bin/sh -c python -m pip install --no-cache-dir numpy==2.4.6 scipy==1.17.1 pandas==3.0.3 pyyaml==6.0.3 jinja2==3.1.6 /tmp/nupack-package/nupack-4.0.2.0-cp312-cp312-linux_x86_64.whl

/bin/sh -c python -m pip install --no-cache-dir redis==7.4.0

WORKDIR /app/service

COPY dir:aef34635c4df6ce79981c64acdbc5a0835b55c39aef9fe0c965222c8848c132d in /app/service

EXPOSE 18765

CMD ["python" "server.py"]

Details

Container

lihato/np_app

2026-07-21 14:16:48 +08:00

OCI / Docker

linux/amd64

414 MiB